Package edu.wisc.ssec.mcidasv.data.hydra

Class NetCDFFile

java.lang.Object

edu.wisc.ssec.mcidasv.data.hydra.NetCDFFile

All Implemented Interfaces:

MultiDimensionReader

public class NetCDFFile
extends Object
implements MultiDimensionReader

Field Summary

Fields

Modifier and Type	Field	Description
private static final org.slf4j.Logger	logger
(package private) NetcdfFile	ncfile
private final Map<String,DataType>	varDataType
private final Map<String,int[]>	varDimLengths
private final Map<String,String[]>	varDimNames
private final Map<String,Variable>	varMap
private final Map<String,String>	varUnits

Constructor Summary

Constructors

Constructor	Description
NetCDFFile(InputStream is)
NetCDFFile(String filename)
NetCDFFile(String filename, org.jdom2.Element root)

Method Summary

Modifier and Type	Method	Description
(package private) void	analyzeStructure(Structure var)
void	close()
Object	getArray(String array_name, int[] start, int[] count, int[] stride)
HDFArray	getArrayAttribute(String array_name, String attr_name)
DataType	getArrayType(String array_name)
String	getArrayUnitString(String array_name)
byte[]	getByteArray(String array_name, int[] start, int[] count, int[] stride)
int	getDimensionLength(String dimName)
int[]	getDimensionLengths(String array_name)
String[]	getDimensionNames(String array_name)
double[]	getDoubleArray(String array_name, int[] start, int[] count, int[] stride)
float[]	getFloatArray(String array_name, int[] start, int[] count, int[] stride)
HDFArray	getGlobalAttribute(String attr_name)
int[]	getIntArray(String array_name, int[] start, int[] count, int[] stride)
NetcdfFile	getNetCDFFile()
short[]	getShortArray(String array_name, int[] start, int[] count, int[] stride)
Map<String,Variable>	getVarMap()
boolean	hasArray(String name)
boolean	hasDimension(String name)
private void	init()
static void	main(String[] args)
static NetCDFFile	makeUnion(String filename, String other)
protected Object	readArray(String array_name, int[] start, int[] count, int[] stride)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

logger

private static final org.slf4j.Logger logger

varMap

private final Map<String,Variable> varMap

varDimNames

private final Map<String,String[]> varDimNames

varDimLengths

private final Map<String,int[]> varDimLengths

varDataType

private final Map<String,DataType> varDataType

varUnits

private final Map<String,String> varUnits

ncfile

NetcdfFile ncfile

Constructor Details

NetCDFFile

public NetCDFFile(InputStream is)
           throws Exception

Throws:

Exception

NetCDFFile

public NetCDFFile(String filename)
           throws Exception

Throws:

Exception

NetCDFFile

public NetCDFFile(String filename,
 org.jdom2.Element root)
           throws Exception

Throws:

Exception

Method Details

makeUnion

public static NetCDFFile makeUnion(String filename,
 String other)
                            throws Exception

Throws:

Exception

init

private void init()
           throws Exception

Throws:

Exception

analyzeStructure

void analyzeStructure(Structure var)
               throws Exception

Throws:

Exception

getArrayType

public DataType getArrayType(String array_name)

Specified by:

getArrayType in interface MultiDimensionReader

getDimensionNames

public String[] getDimensionNames(String array_name)

Specified by:

getDimensionNames in interface MultiDimensionReader

getDimensionLengths

public int[] getDimensionLengths(String array_name)

Specified by:

getDimensionLengths in interface MultiDimensionReader

getArrayUnitString

public String getArrayUnitString(String array_name)

getDimensionLength

public int getDimensionLength(String dimName)

getFloatArray

public float[] getFloatArray(String array_name,
 int[] start,
 int[] count,
 int[] stride)
                      throws Exception

Specified by:

getFloatArray in interface MultiDimensionReader

Throws:

Exception

getIntArray

public int[] getIntArray(String array_name,
 int[] start,
 int[] count,
 int[] stride)
                  throws Exception

Specified by:

getIntArray in interface MultiDimensionReader

Throws:

Exception

getDoubleArray

public double[] getDoubleArray(String array_name,
 int[] start,
 int[] count,
 int[] stride)
                        throws Exception

Specified by:

getDoubleArray in interface MultiDimensionReader

Throws:

Exception

getShortArray

public short[] getShortArray(String array_name,
 int[] start,
 int[] count,
 int[] stride)
                      throws Exception

Specified by:

getShortArray in interface MultiDimensionReader

Throws:

Exception

getByteArray

public byte[] getByteArray(String array_name,
 int[] start,
 int[] count,
 int[] stride)
                    throws Exception

Specified by:

getByteArray in interface MultiDimensionReader

Throws:

Exception

getArray

public Object getArray(String array_name,
 int[] start,
 int[] count,
 int[] stride)
                throws Exception

Specified by:

getArray in interface MultiDimensionReader

Throws:

Exception

readArray

protected Object readArray(String array_name,
 int[] start,
 int[] count,
 int[] stride)
                    throws Exception

Throws:

Exception

getGlobalAttribute

public HDFArray getGlobalAttribute(String attr_name)
                            throws Exception

Specified by:

getGlobalAttribute in interface MultiDimensionReader

Throws:

Exception

getArrayAttribute

public HDFArray getArrayAttribute(String array_name,
 String attr_name)
                           throws Exception

Specified by:

getArrayAttribute in interface MultiDimensionReader

Throws:

Exception

close

public void close()
           throws Exception

Specified by:

close in interface MultiDimensionReader

Throws:

Exception

getVarMap

public Map<String,Variable> getVarMap()

hasArray

public boolean hasArray(String name)

hasDimension

public boolean hasDimension(String name)

getNetCDFFile

public NetcdfFile getNetCDFFile()

main

public static void main(String[] args)
                 throws Exception

Throws:

Exception